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View Structure Prediction Details

Protein: AGP7_ARATH
Organism: Arabidopsis thaliana
Length: 130 amino acids
Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16



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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for AGP7_ARATH.

Description E-value Query
Range
Subject
Range
gi|73986692 - gi|73986692|ref|XP_867987.1| PREDICTED: similar to dynamin 2 isoform 2 isoform 19 [Canis familiaris]
99.0 [0..14] [121..765]

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Predicted Domain #1
Region A:
Residues: [1-130]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MNSKIIEAFF IVALFTTSCL AQAPAPSPTT TVTPPPVATP PPAATPAPTT TPPPAVSPAP  60
   61 TSSPPSSAPS PSSDAPTASP PAPEGPGVSP GELAPTPSDA SAPPPNAALT NKAFVVGSLV 120
  121 AAIIYAVVLA 

[Run NCBI BLAST on this sequence.]

Detection Method: PSI-BLAST
Confidence: 3.221849
Match: 1oqyA
Description: Structure of the DNA repair protein hHR23a
Matching Structure (courtesy of the PDB):

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle