YRC Logo
PROTEIN SEARCH:
Descriptions Names[Advanced Search]

View Structure Prediction Details

Protein: gi|7268444, gi|2...
Organism: Arabidopsis thaliana
Length: 154 amino acids
Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16



[What does the above image mean?]


[Show Ginzu Version Information]


Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for gi|7268444, gi|2....

Description E-value Query
Range
Subject
Range
gi|15242954, gi|... - gi|9759538|dbj|BAB11004.1| disease resistance protein-like [Arabidopsis thaliana], gi|15242954|ref|N...
169.0 [0..1] [153..102]

Back

Predicted Domain #1
Region A:
Residues: [1-154]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MVTPIFYEVD HSDVRKQTGE FGKVFEETCK NKTDDEKQRC RKALADVANM AGEDSRNWCN  60
   61 EANMIETISN DVPNKLITPS SDLGDFVGVE AHLERLSSLL CLESEEARMV GIGKSTLGRA 120
  121 LFSQLSSQFP LRAFVTYKPT EKNRFYQKFY VKRT

[Run NCBI BLAST on this sequence.]

Detection Method: FFAS03
Confidence: 1.84
Match: 1z6tA
Description: Structure of the apoptotic protease-activating factor 1 bound to ADP
Matching Structure (courtesy of the PDB):

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle