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View Structure Prediction Details

Protein: gi|11260412, gi|...
Organism: Arabidopsis thaliana
Length: 492 amino acids
Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16



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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for gi|11260412, gi|....

Description E-value Query
Range
Subject
Range
gi|114657936 - gi|114657936|ref|XP_001175096.1| PREDICTED: hypothetical protein isoform 11 [Pan troglodytes]
539.0 [0..1] [491..87]

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Predicted Domain #1
Region A:
Residues: [1-492]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MEMLLGGRAT NGALRSKTKI VCTLGPVSRS VEMIEKLLKA ETLDNLRTAM NNTGILCAVM  60
   61 LDTKGPEIRT GFLKEGKPIQ LNQGQEITIS IDYKIEGDSN IISMSYKKLA EDVKPGDVIL 120
  121 CSDGTISLTV LSCDKSFGLV RCRCENSTIL GERKNVNLPG IVVDLPTLTE KDKEDIIQWG 180
  181 VPNKIDIIAL SFVRKGSDLT EVRKLLGEHS KNIMLMSKVE NQEGVMNCEK ILENSDAFMV 240
  241 ARGDLGMEIQ IEKMFLAQKT MIKMANALGK PVVTATQMLE SMTVSPRPTR AEATDVANAV 300
  301 LDGTDCVMLS GETAAGAHPE AAVLTMSRIC KEAEDFIDYD ILHKKTLGML SLPLSPIESL 360
  361 AASVVSTAQS VFASAIVVLT KGGYTAELVA KYRPSVPILS VIVPEIAQGN DIEMSCSDSV 420
  421 AHVARRGLIY RGIIPVVATG SSARDSNKDA TEEMINLAIG FAKTKGICKN GDSIVALHKI 480
  481 DGSSVVKIVS VE

[Run NCBI BLAST on this sequence.]

Detection Method: PSI-BLAST
Confidence: 152.0
Match: 1t5aA
Description: Human Pyruvate Kinase M2
Matching Structure (courtesy of the PDB):

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle