| Protein: | gi|15228885, gi|... |
| Organism: | Arabidopsis thaliana |
| Length: | 800 amino acids |
| Reference: | Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16 |
Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for gi|15228885, gi|....
| Description | E-value | Query Range |
Subject Range |
|
|
972.0 | [0..2] | [797..5] |
|
|
969.0 | [0..21] | [792..33] |
|
|
948.0 | [0..2] | [775..5] |
|
|
943.0 | [0..21] | [799..54] |
|
|
940.0 | [0..6] | [791..24] |
|
|
940.0 | [0..24] | [800..57] |
|
|
938.0 | [0..24] | [769..56] |
|
Region A: Residues: [1-206] |
1 11 21 31 41 51
| | | | | |
1 MFRLQSGSES EDESDFEKEE VEGNNTRYLA DLPDGEICCG MDTKRVVKPK KDKRFEEMAN 60
61 TIENMKHAMN INDCVYLQET FEKLNKQISK SVKTPTLYIK TLVMLEDFLN EDNMKTKEKM 120
121 STSNSKALNA MRQKLKKNNL QYQEDIKRFR ESPEIEDDDE YEEEVVEDSA DNVSWEMLFS 180
181 LDHEEITWNM VNKKFKEIRA ARWSKR
|
| Detection Method: |  |
Shown below are all of our structure predictions for this domain.
Click here to view only most confident match.
Found no structure predictions for this domain.
|
Region A: Residues: [207-380] |
1 11 21 31 41 51
| | | | | |
1 RSSSLKLKPG ETHAQKHMDL TKIAKTPAQK VEILFSVISA EFNVNSGGLS GYMPIDVWKK 60
61 CVVNMLTILD ILVKYYNIVV DDTVEPDEKE TSKPAAYDGT IRVSGNLVAF LEKIETEFFK 120
121 SLQCIDPHTN DYVERLKDEP MFLALAQSIQ DYLERTGDSK AASKVAFILV ESIY
|
| Detection Method: | |
Shown below are all of our structure predictions for this domain.
Click here to view only most confident match.
Found no structure predictions for this domain.
|
Region A: Residues: [381-485] |
1 11 21 31 41 51
| | | | | |
1 YKPQEVFDAM SKLADEEIEE ANEESGSSSS SFIVVAEIVP RKPTFAKSSR AMMDTLVSFI 60
61 YKNGDERTKA RAMLCDIYQH ALMDNFVTAR DLLLMSHLQE NIQHM
|
| Detection Method: | |
Shown below are all of our de novo (Rosetta) predictions for this domain.
Click here to view only most confident match.
| MCM Score |
SCOP Match |
SCOP Description | ||
| View | Download | 0.905 | a.118.1 | ARM repeat |
| View | Download | 0.678 | a.118.1 | ARM repeat |
| View | Download | 0.678 | a.118.1 | ARM repeat |
| View | Download | 0.631 | c.114.1 | YchN-like |
| View | Download | 0.616 | a.29.10 | Description not found. |
| View | Download | 0.613 | a.243.1 | Description not found. |
| View | Download | 0.598 | a.158.1 | F-box domain |
| View | Download | 0.566 | d.58.39 | Glutamyl tRNA-reductase catalytic, N-terminal domain |
| View | Download | 0.512 | d.58.39 | Glutamyl tRNA-reductase catalytic, N-terminal domain |
| View | Download | 0.506 | a.29.2 | Bromodomain |
|
Region A: Residues: [486-604] |
1 11 21 31 41 51
| | | | | |
1 DISTQILFNR TMAQLGLCAF RVGMITESHS CLSELYSGNR VRELLGQGVS QSRDHEKTTE 60
61 QMLMERRTQI PYHMNINLEL LEAVYLTCAM LLEVPNMAAN SHDSKHKPIS KNIQRLLEK
|
| Detection Method: | |
Shown below are all of our structure predictions for this domain.
Click here to view only most confident match.
| MCM Score |
GO Score |
GO Term |
SCOP Match |
SCOP Description | ||
| View | Download | 0.771 | N/A | N/A | a.24.3 | Cytochromes |
| View | Download | 0.700 | N/A | N/A | a.24.7 | FKBP12-rapamycin-binding domain of FKBP-rapamycin-associated protein (FRAP) |
| View | Download | 0.700 | N/A | N/A | a.24.7 | FKBP12-rapamycin-binding domain of FKBP-rapamycin-associated protein (FRAP) |
| View | Download | 0.679 | N/A | N/A | a.46.1 | Methionine synthase domain |
| View | Download | 0.669 | N/A | N/A | a.80.1 | DNA polymerase III clamp loader subunits, C-terminal domain |
| View | Download | 0.644 | N/A | N/A | a.46.1 | Methionine synthase domain |
| View | Download | 0.605 | N/A | N/A | a.80.1 | DNA polymerase III clamp loader subunits, C-terminal domain |
| View | Download | 0.605 | N/A | N/A | a.80.1 | DNA polymerase III clamp loader subunits, C-terminal domain |
| View | Download | 0.582 | N/A | N/A | a.78.1 | Fatty acid responsive transcription factor FadR, C-terminal domain |
| View | Download | 0.329 | N/A | N/A | a.165.1 | Myosin phosphatase inhibitor 17kDa protein, CPI-17 |
| View | Download | 0.262 | N/A | N/A | a.152.1 | Antioxidant defence protein AhpD |
| View | Download | 0.251 | N/A | N/A | f.21.2 | Fumarate reductase respiratory complex transmembrane subunits |
| View | Download | 0.220 | N/A | N/A | f.21.2 | Fumarate reductase respiratory complex transmembrane subunits |
| View | Download | 0.214 | N/A | N/A | a.130.1 | Chorismate mutase II |
|
Region A: Residues: [605-729] |
1 11 21 31 41 51
| | | | | |
1 SEKQAFTAPP ENVRVHVIAA TRALIKGNFQ EAFSVLNSLD IWRLFKNRDS ILDMVKASIS 60
61 EVALRTYLFT YSSSCYKSLS LAELAKMFDI SESHVYSIVS KMMINKELNA TWDQPTQCIV 120
121 FHEVQ
|
| Detection Method: | |
| Confidence: | 2.15 |
| Match: | 1ufmA |
| Description: | Solution structure of the PCI domain |
Matching Structure (courtesy of the PDB): |
|
|
Region A: Residues: [730-800] |
1 11 21 31 41 51
| | | | | |
1 HNRAQSLAFQ ITEKLATLAE SNESAMESKT GGVGLDMTSR RRENSQDYAA AASDNRGLKM 60
61 DGSSLTRGVS A
|
| Detection Method: | |
| Confidence: | 15.346787 |
| Match: | PF05469.2 |
| Description: | No description for PF05469.2 was found. |
Shown below are all of our structure predictions for this domain.
Click here to view only most confident match.
Found no structure predictions for this domain.
