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View Structure Prediction Details

Protein: CXIP4_ARATH
Organism: Arabidopsis thaliana
Length: 332 amino acids
Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16



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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for CXIP4_ARATH.

Description E-value Query
Range
Subject
Range
gi|55962838, gi|... - gi|57209531|emb|CAI40685.1| calcium channel, voltage-dependent, N type, alpha 1B subunit [Homo sapie...
191.0 [0..31] [326..706]

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Predicted Domain #1
Region A:
Residues: [1-108]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MPATAGRVRM PANNRVHSSA ALQTHGIWQS AIGYDPYAPT SKEEPKTTQQ KTEDPENSYA  60
   61 SFQGLLALAR ITGSNNDEAR GSCKKCGRVG HLTFQCRNFL STKEDKEK

[Run NCBI BLAST on this sequence.]

Detection Method: MSA

Shown below is our most confident prediction for this domain.
Click here to view all matches.

Found no confident structure predictions for this domain.

Predicted Domain #2
Region A:
Residues: [109-332]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 DPGAIEAAVL SGLEKIRRGV GKGEVEEVSS EEEEESESSD SDVDSEMERI IAERFGKKKG  60
   61 GSSVKKTSSV RKKKKRVSDE SDSDSDSGDR KRRRRSMKKR SSHKRRSLSE SEDEEEGRSK 120
  121 RRKERRGRKR DEDDSDESED EDDRRVKRKS RKEKRRRRSR RNHSDDSDSE SSEDDRRQKR 180
  181 RNKVAASSDS EANVSGDDVS RVGRGSSKRS EKKSRKRHHR KERE

[Run NCBI BLAST on this sequence.]

Detection Method: MSA

Shown below is our most confident prediction for this domain.
Click here to view all matches.

Found no confident structure predictions for this domain.


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