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View Structure Prediction Details

Protein: ELF4_ARATH
Organism: Arabidopsis thaliana
Length: 111 amino acids
Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16



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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for ELF4_ARATH.

Description E-value Query
Range
Subject
Range
gi|4680201 - gi|4680201|gb|AAD27564.1|AF114171_5 hypothetical protein [Sorghum bicolor]
172.0 [0..13] [106..1]
gi|8778455, gi|9... - gi|9665116|gb|AAF97300.1|AC007843_3 Hypothetical protein [Arabidopsis thaliana], gi|8778455|gb|AAF79...
129.0 [0..22] [105..16]
gi|4680489 - gi|4680489|gb|AAD27669.1|AF119222_1 hypothetical protein [Oryza sativa]
gi|125535148 - gi|125535148|gb|EAY81696.1| hypothetical protein OsI_36872 [Oryza sativa Indica Group]
127.0 [0..13] [105..9]

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Predicted Domain #1
Region A:
Residues: [1-111]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MKRNGETKRR RNVAEEAEQG EDPAMWENLD RNFRQVQSVL DRNRSLIQQV NDNHQSRMAD  60
   61 NMSKNVALIQ ELNGNISKVV NMYSDLNTSF SSGFHGGKNG HDGGGAAGTR A

[Run NCBI BLAST on this sequence.]

Detection Method: Pfam
Confidence: 60.376751
Match: PF07011.2
Description: No description for PF07011.2 was found.

Shown below are all of our structure predictions for this domain.
Click here to view only most confident match.

    MCM
Score
GO
Score
GO
Term
SCOP
Match
SCOP Description
View Download 0.678 N/A N/A a.35.1 lambda repressor-like DNA-binding domains
View Download 0.678 N/A N/A a.35.1 lambda repressor-like DNA-binding domains
View Download 0.580 N/A N/A a.5.3 N-terminal domain of phosphatidylinositol transfer protein sec14p
View Download 0.460 N/A N/A a.45.1 Glutathione S-transferase (GST), C-terminal domain
View Download 0.460 N/A N/A a.45.1 Glutathione S-transferase (GST), C-terminal domain
View Download 0.447 N/A N/A a.4.1 Homeodomain-like
View Download 0.445 N/A N/A a.5.3 N-terminal domain of phosphatidylinositol transfer protein sec14p
View Download 0.442 N/A N/A a.45.1 Glutathione S-transferase (GST), C-terminal domain
View Download 0.388 N/A N/A a.45.1 Glutathione S-transferase (GST), C-terminal domain
View Download 0.269 N/A N/A a.74.1 Cyclin-like
View Download 0.256 N/A N/A a.45.1 Glutathione S-transferase (GST), C-terminal domain
View Download 0.204 N/A N/A d.52.1 Alpha-lytic protease prodomain


YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle