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View Structure Prediction Details

Protein: DABB1_ARATH
Organism: Arabidopsis thaliana
Length: 210 amino acids
Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16



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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for DABB1_ARATH.

Description E-value Query
Range
Subject
Range
UP3_ARATH - Stress-response A/B barrel domain-containing protein UP3 OS=Arabidopsis thaliana GN=UP3 PE=2 SV=1
246.0 [0..2] [207..46]

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Predicted Domain #1
Region A:
Residues: [1-104]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MSSIVEHVVL FKLNDDDVDS GKINSMVNGI NELVNLDQVL HLYCGSIHRL ITTTASDFTH  60
   61 VLHSRYRSKE DLNAYAIHPD HVRVVKESES IREDIMAVDW IAEQ

[Run NCBI BLAST on this sequence.]

Detection Method: PSI-BLAST
Confidence: 23.69897
Match: 1q4rA
Description: Gene Product of At3g17210 from Arabidopsis Thaliana
Matching Structure (courtesy of the PDB):

Predicted Domain #2
Region A:
Residues: [105-210]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 APEALAPPLG SIGKITLLKL KENVMEEAKL EIMEVMKEKF EGIDQITVGE NFSPGRSKDF  60
   61 SIGSISYFRD LGEIEAVDDQ MKLQNDKIRD YVDDTIVVEF NVPSSS

[Run NCBI BLAST on this sequence.]

Detection Method: FFAS03
Confidence: 2.26
Match: 1q4rA
Description: Gene Product of At3g17210 from Arabidopsis Thaliana
Matching Structure (courtesy of the PDB):

YRC Informatics Platform - Version 3.0
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