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View Structure Prediction Details

Protein: SUC9_ARATH
Organism: Arabidopsis thaliana
Length: 491 amino acids
Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16



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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for SUC9_ARATH.

Description E-value Query
Range
Subject
Range
gi|51971162 - gi|51971162|dbj|BAD44273.1| hypothetical protein [Arabidopsis thaliana]
185.0 [0..1] [491..1]

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Predicted Domain #1
Region A:
Residues: [1-491]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MSDIQAKEDA APVDRQSSSS VVVPDEPSPL RKMISVASIA AGIQFGWALQ LSLLTPYVQL  60
   61 LGVPHKWSSF IWLCGPISGL LVQPTVGYFS DRCKSRFGRR RPFIATGALL VALAVILIGF 120
  121 AADFGHTMGD KLDEAVKIRA VGFFVVGFWI LDVANNTLQG PCRAFLGDLA AGDAKKTRTA 180
  181 NAIFSFFMAV GNVLGYAAGS YTNLHKIFPF TVTKACDIYC ANLKSCFIIS ITLLIVLTII 240
  241 ALWYVEDKQW SPNADSDNEK TPFFGEIFGA FKVMKRPMWM LLAVTALNWI AWFPFLLYDT 300
  301 DWMGREVYGG DSAGDDKMKK LYNHGIQVGS LGLMLNSIVL GVMSLVIGVI SKKIGAKRLW 360
  361 GAVNIILAVC LAMTVLVTKK AEEHRKIAGR MALPTNAIRD GALSLFAILG IPLAITFSIP 420
  421 FALASIISSS SGAGQGLSLG VLNMAIVIPQ MIVSFGVGPI DALFGGGNLP GFVVGAIAAL 480
  481 ISSVVALTVL P

[Run NCBI BLAST on this sequence.]

Detection Method: PSI-BLAST
Confidence: 22.0
Match: 1pw4A
Description: Crystal Structure of the Glycerol-3-Phosphate Transporter from E.Coli
Matching Structure (courtesy of the PDB):

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