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View Structure Prediction Details

Protein: SCP53_ARATH
Organism: Arabidopsis thaliana
Length: 264 amino acids
Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16



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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for SCP53_ARATH.

Description E-value Query
Range
Subject
Range
SCP39_ARATH - Serine carboxypeptidase-like 39 OS=Arabidopsis thaliana GN=SCPL39 PE=2 SV=1
349.0 [0..1] [261..1]

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Predicted Domain #1
Region A:
Residues: [1-264]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MGKLQDWSIT TCLFLFFLHA SQTHCTSQSH VRNRLYRSKR GIGSSIDTSH LNAIRRLSVS  60
   61 LSLQNISGVN QQEQKERDLI ENLPGQPSVN FKQYGGYVTV NESAGRSLYY YFVEATNTKN 120
  121 SSPLVLWLNG GPGCSSLYGA FQELGPFRVH SDNKTLYTNP YSWNNVANML FLESPAGTGF 180
  181 SYTNTTTDME NPGDMKTAAD NYVFLVKWLE RFPEYKGRDF YIAGESYAGH YVQWRHGCGD 240
  241 FGDSYNVRTE DDESNGCYGM ASVV

[Run NCBI BLAST on this sequence.]

Detection Method: PSI-BLAST
Confidence: 65.522879
Match: 1bcrA
Description: Serine carboxypeptidase II
Matching Structure (courtesy of the PDB):

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle