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View Structure Prediction Details

Protein: gi|186514102, gi...
Organism: Arabidopsis thaliana
Length: 1058 amino acids
Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16



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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for gi|186514102, gi....

Description E-value Query
Range
Subject
Range
gi|70878483 - gi|70878483|gb|EAN91735.1| trans-sialidase, putative [Trypanosoma cruzi]
gi|71649745 - gi|71649745|ref|XP_813586.1| trans-sialidase [Trypanosoma cruzi strain CL Brener]
325.0 [0..115] [1057..692]
CE04485 - WBGene00018024 status:Partially_confirmed TR:Q20007 protein_id:AAB52641.1
209.0 [0..46] [1045..258]
gi|114187791, gi... - gi|115385595|ref|XP_001209344.1| predicted protein [Aspergillus terreus NIH2624], gi|114187791|gb|EA...
208.0 [0..43] [1056..167]
gi|118777847, gi... - gi|118777847|ref|XP_308312.3| ENSANGP00000024414 [Anopheles gambiae str. PEST], gi|116132098|gb|EAA4...
202.0 [0..37] [1058..332]
gi|110755343 - gi|110755343|ref|XP_001122007.1| PREDICTED: similar to tenectin CG13648-PA, partial [Apis mellifera]
199.0 [0..32] [1052..2025]
gi|157769291 - gi|157769291|ref|XP_001676466.1| Hypothetical protein CBG14291 [Caenorhabditis briggsae AF16]
gi|187027801, gi... - gi|39597796|emb|CAE68488.1| Hypothetical protein CBG14291 [Caenorhabditis briggsae], gi|187027801|em...
192.0 [0..31] [1043..98]
gi|3327870 - gi|3327870|dbj|BAA31739.1| COP1-Interacting ProteinI 7 (CIP7) [Arabidopsis thaliana]
189.0 [0..1] [235..1]

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Predicted Domain #1
Region A:
Residues: [1-102]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MDPRTRLDYA LFQLTPTRTR CDLVIFSGGE NEKLASGIFQ PFVTHLKSVS DQISKGGYSV  60
   61 TLRPSSVGVP WFTKVTLQRF VRFVTTPEVL ERSVTLEKEI EQ

[Run NCBI BLAST on this sequence.]

Detection Method: MSA

Shown below is our most confident prediction for this domain.
Click here to view all matches.

Found no confident structure predictions for this domain.

Predicted Domain #2
Region A:
Residues: [103-231]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 IEDSIQANAA AIAGEAEGNE LGGTWTSQKS TALSKTKGET DGDTVEENSK VGLQRVLENR  60
   61 KAALCKEQAM AYARALVVGF ELDYMDDLFS FADAFGASRL REACVNFVDL CKRKNEDRMW 120
  121 VDQITAMQA

[Run NCBI BLAST on this sequence.]

Detection Method: deduced

Shown below is our most confident de novo (Rosetta) prediction for this domain.
Click here to view all matches.

Found no confident structure predictions for this domain.

Predicted Domain #3
Region A:
Residues: [232-364]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 FPRPELTFMG DSGIVLAGEE NDLLNATNVK HGNSMDASSQ GSFETGQEGR AQMAMPWPNQ  60
   61 FPQYMQNFQG HGYPPPYMFP GMQGQSPYFH GNMQWPVNMG DVESNEKSSK KKKKKKKNKK 120
  121 KSKQDESAEP SDN

[Run NCBI BLAST on this sequence.]

Detection Method: deduced

Shown below is our most confident de novo (Rosetta) prediction for this domain.
Click here to view all matches.

Found no confident structure predictions for this domain.

Predicted Domain #4
Region A:
Residues: [365-539]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 SSTETESEDG NEGKKQSRKV VIRNINYITS KRNGAKESDS DESGEEEGFV DGDSIKQQVE  60
   61 EAIGSVERRH KSTSHRQRKH KSHNGDDDSS NKETKGNDNW DAFQNLLLKD NDSEPEELLR 120
  121 ISSTALNMAS EVVRKREPPS DDSFLVAIGN EDWGRETSIE KFNAGENVRI IRKGN

[Run NCBI BLAST on this sequence.]

Detection Method: deduced

Shown below is our most confident de novo (Rosetta) prediction for this domain.
Click here to view all matches.

Found no confident structure predictions for this domain.

Predicted Domain #5
Region A:
Residues: [540-781]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 NYDEEMLNPG RSDESRSYSQ AEMSVHDGKL RTRNEAEEDW FIRNQAGPET DPSLVKTFVG  60
   61 DHFHLNKSSE RDVLTDDSFM IHSRVENQVE DSRLRTEIMD LDVYGTTQQE NSAPENTPHE 120
  121 PDDLYMVLGR EQDVKPTLLP WTPEIDFETN TLAQRTSRID LITATKASAG EQTLDGKEKK 180
  181 SRGISKGKDA KSRASSRPDP ASKAKRPAWG SRAAVSKSKS EMEEERKKRM EELLIQRQKR 240
  241 IA

[Run NCBI BLAST on this sequence.]

Detection Method: deduced

Shown below is our most confident de novo (Rosetta) prediction for this domain.
Click here to view all matches.

Found no confident structure predictions for this domain.

Predicted Domain #6
Region A:
Residues: [782-855]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 EKSSGGSVSS SLASKKTPTV TKSVKSSIKN EKTPEAAQSK AKPVLRSSTI ERLAVARTAP  60
   61 KEPQQKPVIK RTSK

[Run NCBI BLAST on this sequence.]

Detection Method: deduced

Shown below is our most confident de novo (Rosetta) prediction for this domain.
Click here to view all matches.

Found no confident structure predictions for this domain.

Predicted Domain #7
Region A:
Residues: [856-1058]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 PSGYKTEKAQ EKKSSKIGQS DAKSVELSRD PSLEIKETVV EDSHSYLSEK QVDALPAVAS  60
   61 VDDFKDIKEL HSLPSEETAR VKNRPNEIIA EKVQDQTKID DQETVKNTSV SEDKQITTKH 120
  121 YSEDVGEVQA SQEKPVSPKK SVTFSETNME EKYYFSPAVS EIDISTPPAT EADHSRKKWN 180
  181 SEETSPKATA KVFRKLLMFG RKK

[Run NCBI BLAST on this sequence.]

Detection Method: MSA

Shown below is our most confident prediction for this domain.
Click here to view all matches.

Found no confident structure predictions for this domain.


YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle