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View Structure Prediction Details

Protein: ERLI1_ARATH
Organism: Arabidopsis thaliana
Length: 168 amino acids
Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16



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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for ERLI1_ARATH.

Description E-value Query
Range
Subject
Range
ERLL3_ARATH - pEARLI1-like lipid transfer protein 3 OS=Arabidopsis thaliana GN=At4g12500 PE=2 SV=1
152.0 [0..1] [168..1]

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Predicted Domain #1
Region A:
Residues: [1-85]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MASKNSASIA LFFALNIIFF TLTAATDCGC NPSPKHKPVP SPKPKPVPSP KPKPVPSPSV  60
   61 PSPSVPSPNP RPVTPPRTPG SSGNC

[Run NCBI BLAST on this sequence.]

Detection Method: FFAS03
Confidence: 0.962
Match: 1pk8A
Description: Crystal Structure of Rat Synapsin I C Domain Complexed to Ca.ATP
Matching Structure (courtesy of the PDB):

Predicted Domain #2
Region A:
Residues: [86-168]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 PIDALRLGVC ANVLSSLLNI QLGQPSAQPC CSLIQGLVDL DAAICLCTAL RANVLGINLN  60
   61 VPISLSVLLN VCNRKVPSGF QCA

[Run NCBI BLAST on this sequence.]

Detection Method: PSI-BLAST
Confidence: 12.0
Match: 1hypA
Description: CRYSTAL STRUCTURE OF HYDROPHOBIC PROTEIN FROM SOYBEAN; A MEMBER OF A NEW CYSTINE-RICH FAMILY
Matching Structure (courtesy of the PDB):

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle