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View Structure Prediction Details

Protein: gi|21592811, gi|...
Organism: Arabidopsis thaliana
Length: 244 amino acids
Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16



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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for gi|21592811, gi|....

Description E-value Query
Range
Subject
Range
gi|73952987 - gi|73952987|ref|XP_863272.1| PREDICTED: similar to calcium/calmodulin-dependent protein kinase II ga...
285.0 [0..15] [240..205]

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Predicted Domain #1
Region A:
Residues: [1-100]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MALHGSGVFC KVSNMVEITS PFGGSMRLLH LPKSYPIHCN MVSASNTFGS AHLKLQNKEP  60
   61 CSRLRPCRVK REENNQTADV ESISMDENTL KQDLETAVQE 

[Run NCBI BLAST on this sequence.]

Detection Method: PSI-BLAST
Confidence: 14.69897
Match: 2bdwA
Description: Crystal Structure of the Auto-Inhibited Kinase Domain of Calcium/Calmodulin Activated Kinase II
Matching Structure (courtesy of the PDB):

Predicted Domain #2
Region A:
Residues: [101-244]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 ENYVEAAKIR DKLKELQEDN KASVLSANSR FYQSFRNGDL AAMQSLWSKS GNPCCVHPGA  60
   61 KGITGYDYVM ESWELVWMNY EFPLLIELKD VEVHVRGEVG YVTCMEFVKT KGSSSWGAQF 120
  121 VSNVFERIDG QWFICIHHAS PVDI

[Run NCBI BLAST on this sequence.]

Detection Method: PSI-BLAST
Confidence: 43.0
Match: 1hkxA
Description: Association donain of calcium/calmodulin-dependent protein kinase type II alpha subunit, CAMK2A
Matching Structure (courtesy of the PDB):

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