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View Structure Prediction Details

Protein: GGLO4_ARATH
Organism: Arabidopsis thaliana
Length: 577 amino acids
Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16



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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for GGLO4_ARATH.

Description E-value Query
Range
Subject
Range
gi|28393420 - gi|28393420|gb|AAO42132.1| unknown protein [Arabidopsis thaliana]
446.0 [0..1] [577..1]

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Predicted Domain #1
Region A:
Residues: [1-577]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MSFWLSLIFC FFTFASSSPP DDPVNCEFGN TMCTVTNSYG AFPDRSICKA AKVEYPRTEA  60
   61 ELVSIVAAAT RAGQKMRVVT RYSHSFPKLV CTDGKDGTLI STKFLNHVVT TNPEAKTLTV 120
  121 ESGVTLRQLI EEAAKFDLAL PYAPYWWGLT VGGMMGTGAH GSSLWGKGSA VHDYVTEIRL 180
  181 VSPGLASDGY VKVQVLSETI DPEEFRAAKV SLGVLGVISQ VTFELQPMFK RSLNYVMRND 240
  241 SDFGDQAVSF GERHEFADFL WLPSQGKVVY RMDGRVPLNT SGDGLFEFFP FRSQLSLVLA 300
  301 IDRSLEESEE SLEDANMKCV RAKLVSSSMF LMSYGVTNNG LIFTGYPVIG MQNHMMSSGS 360
  361 CLDSRQDGLI TACPWDPRIK GQFFHQTTFS VSLTNVKSFI NDIKALVKIE PKSLCVLEGS 420
  421 NGILIRYVTS SLAFLGKEEK ALDFDLTYYR SKNDPLAPRL YEDYIEEIEQ MAIFKYNALP 480
  481 HWGKNRNLAF DGAIRKYKNA NAFLKVKEKF DSLGLFSTEW TDQILGLKGN VTIVKQGCAL 540
  541 EGLCICSEDS HCAPTKGYLC RPGKVYREAR VCTRVSS

[Run NCBI BLAST on this sequence.]

Detection Method: PSI-BLAST
Confidence: 44.522879
Match: 2bvfA
Description: Crystal structure of 6-hydoxy-D-nicotine oxidase from Arthrobacter nicotinovorans. Crystal Form 3 (P21)
Matching Structure (courtesy of the PDB):

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle