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View Structure Prediction Details

Protein: CSLB2_ARATH
Organism: Arabidopsis thaliana
Length: 757 amino acids
Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16



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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for CSLB2_ARATH.

Description E-value Query
Range
Subject
Range
gi|47933336 - gi|47933336|gb|AAQ63936.1| cellulose synthase [Pinus radiata]
718.0 [0..1] [756..235]

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Predicted Domain #1
Region A:
Residues: [1-77]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MADSSCSLPP LYENISYKSY ILRAVDLTIL GLLFSLLLHR ILYMSQNGII WLVAFLCESC  60
   61 FSFVWLLSTC TKWSPAE

[Run NCBI BLAST on this sequence.]

Detection Method: MSA

Shown below is our most confident prediction for this domain.
Click here to view all matches.

Found no confident structure predictions for this domain.

Predicted Domain #2
Region A:
Residues: [78-519]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 TKPYPDRLDE RVYDLPSVDM FVPTADPVRE PPIMVVNTVL SLLAVNYPAN KLACYVSDDG  60
   61 CSPLTYFSLK EASKFAKIWV PFCKKYNLKV RAPFRYFLNP FAATEGSEFS RDWEMTKREY 120
  121 EKLCRKVEDA TGDSHLLGTD NELEAFSNTK PNDHSTIIKV VWENKGGVGD EKEVPHIVYI 180
  181 SREKRPNYLH HYKAGAMNFL ARVSGLMTNA PYMLNVDCDM YANEADVVRQ AMCIFLQKSQ 240
  241 NQNHCAFVQF PQEFYDSNTI KLTVIKSYMG RGIAGIQGPI NVGSGCFHSR RVMYGLSPDE 300
  301 LEDNGSLSSV ATRELLAEDS LSSGFGNSKE MVTSVVEALQ RKPNPQNILT NSIEAAQEVG 360
  361 HCDYESQTSW GKTIGWLYDS MSEDMNTSIG IHSRGWTSSY IAPDPPAFLG SMPPGGLEAM 420
  421 IQQRRWATGS IEVLFNKQSP LL

[Run NCBI BLAST on this sequence.]

Detection Method: FFAS03
Confidence: 2.69
Match: 2d7iA
Description: No description for 2d7iA was found.

Predicted Domain #3
Region A:
Residues: [520-757]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 GLFCRKLRFR QRVAYLCVSI CVRSIPELIY CLLPAYCLLH NSALFPKGLC LGITMLLAGM  60
   61 HCLYTLWEFM CLGHSIQSWY VSQSFWRIVA TSSWLFSIFD IILKLLGLSK NVFLVSKKTM 120
  121 PVETMSGSGI GPSQREDDGP NSGKTEFDGS LYFLPGTFIV LVNLAALVGV FVGLQRSSYS 180
  181 HGGGGSGLGE ACACILVVML FFPFLKGLFA KGKYGIPLST LSKAGFLAVS FVVFSVGN

[Run NCBI BLAST on this sequence.]

Detection Method: MSA

Shown below is our most confident prediction for this domain.
Click here to view all matches.

Found no confident structure predictions for this domain.


YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle