| Protein: | gi|7267584, gi|1... |
| Organism: | Arabidopsis thaliana |
| Length: | 457 amino acids |
| Reference: | Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16 |
Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for gi|7267584, gi|1....
| Description | E-value | Query Range |
Subject Range |
|
|
343.0 | [0..2] | [453..5] |
|
|
341.0 | [0..1] | [453..1] |
|
|
339.0 | [0..1] | [448..1] |
|
|
337.0 | [0..10] | [453..16] |
|
Region A: Residues: [1-93] |
1 11 21 31 41 51
| | | | | |
1 MYSSSSSSTP KFDVFLSFSV EAETLVSDLR SSFSENGITM KDDDLEKGVS SLGSERSEGI 60
61 RESKVAVVVI SQSYAISAQC LNELQTIVNF HDE
|
| Detection Method: |  |
| Confidence: | 3.69897 |
| Match: | 1fyvA |
| Description: | Toll-like receptor 1, TLR1 |
Matching Structure (courtesy of the PDB): |
|
|
Region A: Residues: [94-173] |
1 11 21 31 41 51
| | | | | |
1 RRISILPIFY GVDYDDVRNQ IKELAASFRK LGKEYPSEKV QAWMIALIKL INISRSDSRI 60
61 HDDETTIDMV ITSQVKQILL
|
| Detection Method: | |
Shown below is our most confident de novo (Rosetta) prediction for this domain.
Click here to view all matches.
| MCM Score |
SCOP Match |
SCOP Description | ||
| View | Download | 0.941 | a.7.6 | Ribosomal protein S20 |
|
Region A: Residues: [174-457] |
1 11 21 31 41 51
| | | | | |
1 DKDKQINLKA TISHTVSNKQ INSLTTKNVG LIGLDRHMLA LNELLDLKSN EEVRLIGICG 60
61 QGGVGKTTLA RYVYEELFKN FHAHVFVDNA GKIYKQDTDE SHSQKSLTSK EIQEGTQTVT 120
121 RTLTVASDFI KSTVSHQRSL LVVDCVDNIK QLEEIANIVG LCFPGSRVIL VTQDKKLLDD 180
181 FGVEHVYEVQ SLRYDEALQV FSQSAFNQQH PPASFESLSF RAVRVAGFLP LLLKILGSSL 240
241 QDKDGKYWEK ELQRLEGGQE KAIMEVMKKS CTREKVPTFI FPLN
|
| Detection Method: | |
| Confidence: | 15.39794 |
| Match: | 1z6tA |
| Description: | Structure of the apoptotic protease-activating factor 1 bound to ADP |
Matching Structure (courtesy of the PDB): |
|
