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View Structure Prediction Details

Protein: gi|3892704, gi|2...
Organism: Arabidopsis thaliana
Length: 120 amino acids
Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16



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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for gi|3892704, gi|2....

Description E-value Query
Range
Subject
Range
gi|7267104, gi|3... - pir||T01345 hypothetical protein F6N15.21 - Arabidopsis thaliana, gi|7267104|emb|CAB80775.1| putati...
127.0 [0..3] [116..275]

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Predicted Domain #1
Region A:
Residues: [1-120]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MASKSSTTIS LIIILLISLA EANLLSSPTP TNNFGSCPRN PLQLGVCANV LGLANVTAGD  60
   61 PRARQCCTAL NGLTNVQVTD CLCFIFRPIP LVFGIDVAVR EIFFACNRVF PIGFQCPPPQ 120
  121 

[Run NCBI BLAST on this sequence.]

Detection Method: PSI-BLAST
Confidence: 11.221849
Match: 1hypA
Description: CRYSTAL STRUCTURE OF HYDROPHOBIC PROTEIN FROM SOYBEAN; A MEMBER OF A NEW CYSTINE-RICH FAMILY
Matching Structure (courtesy of the PDB):

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle