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View Structure Prediction Details

Protein: YB95_ARATH
Organism: Arabidopsis thaliana
Length: 250 amino acids
Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16



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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for YB95_ARATH.

Description E-value Query
Range
Subject
Range
gi|21593469 - gi|21593469|gb|AAM65436.1| unknown [Arabidopsis thaliana]
325.0 [0..1] [250..1]

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Predicted Domain #1
Region A:
Residues: [1-250]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MALAWCVVRR SASKFASVYG GRVRSISAVA NRASLARNPS SIRPFVSRAL NYSTAIDRIS  60
   61 SEQTLIRVID SEINSALQSD NIDSDEEMTP GSFPFRIEDK PGNQNVTLTR DYNGEHIKVV 120
  121 VSMPSLVSDE NDDDDDDDEG PSNESSIPLV VTVTKKSGLT LEFSCMAFPD EIAIDALSVK 180
  181 HPGDSLEDQL ANEGPDFEDL DENLKKTFYK FLEIRGVKAS TTNFLHEYMT RKVNREYFLW 240
  241 LKNVKEFMEQ 

[Run NCBI BLAST on this sequence.]

Detection Method: PSI-BLAST
Confidence: 51.0
Match: 1p32A
Description: Acidic mitochondrial matrix protein p32
Matching Structure (courtesy of the PDB):

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle