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View Structure Prediction Details

Protein: XTH9_ARATH
Organism: Arabidopsis thaliana
Length: 290 amino acids
Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16



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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for XTH9_ARATH.

Description E-value Query
Range
Subject
Range
gi|113869744, gi... - gi|87241320|gb|ABD33178.1| Glycoside hydrolase, family 16; Xyloglucan endo-transglycosylase, C-termi...
353.0 [0..2] [290..1]

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Predicted Domain #1
Region A:
Residues: [1-290]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MVGMDLFKCV MMIMVLVVSC GEAVSGAKFD ELYRSSWAMD HCVNEGEVTK LKLDNYSGAG  60
   61 FESRSKYLFG KVSIQIKLVE GDSAGTVTAF YMSSDGPNHN EFDFEFLGNT TGEPYIVQTN 120
  121 IYVNGVGNRE QRLNLWFDPT TEFHTYSILW SKRSVVFMVD ETPIRVQKNL EEKGIPFAKD 180
  181 QAMGVYSSIW NADDWATQGG LVKTDWSHAP FVASYKEFQI DACEIPTTTD LSKCNGDQKF 240
  241 WWDEPTVSEL SLHQNHQLIW VRANHMIYDY CFDATRFPVT PLECQHHRHL 

[Run NCBI BLAST on this sequence.]

Detection Method: PSI-BLAST
Confidence: 95.0
Match: 1umzA
Description: Xyloglucan endotransglycosylase in complex with the xyloglucan nonasaccharide XLLG.
Matching Structure (courtesy of the PDB):

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle