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View Structure Prediction Details

Protein: XTH7_ARATH
Organism: Arabidopsis thaliana
Length: 293 amino acids
Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16



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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for XTH7_ARATH.

Description E-value Query
Range
Subject
Range
gi|22947847 - gi|22947847|gb|AAN07897.1| xyloglucan endotransglycosylase [Malus x domestica]
348.0 [0..3] [289..1]

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Predicted Domain #1
Region A:
Residues: [1-293]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MVVSLFSSRN VFYTLSLCLF AALYQPVMSR PAKFEDDFRI AWSDTHITQI DGGRAIQLKL  60
   61 DPSSGCGFAS KKQYLFGRVS MKIKLIPGDS AGTVTAFYMN SDTDSVRDEL DFEFLGNRSG 120
  121 QPYTVQTNVF AHGKGDREQR VNLWFDPSRD FHEYAISWNH LRIVFYVDNV PIRVYKNNEA 180
  181 RKVPYPRFQP MGVYSTLWEA DDWATRGGIE KINWSRAPFY AYYKDFDIEG CPVPGPADCP 240
  241 ANSKNWWEGS AYHQLSPVEA RSYRWVRVNH MVYDYCTDKS RFPVPPPECS AGI

[Run NCBI BLAST on this sequence.]

Detection Method: PSI-BLAST
Confidence: 93.0
Match: 1umzA
Description: Xyloglucan endotransglycosylase in complex with the xyloglucan nonasaccharide XLLG.
Matching Structure (courtesy of the PDB):

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle