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View Structure Prediction Details

Protein: XTH30_ARATH
Organism: Arabidopsis thaliana
Length: 343 amino acids
Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16



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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for XTH30_ARATH.

Description E-value Query
Range
Subject
Range
gi|21618261 - gi|21618261|gb|AAM67311.1| endoxyloglucan transferase, putative [Arabidopsis thaliana]
320.0 [0..1] [343..1]

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Predicted Domain #1
Region A:
Residues: [1-343]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MSKSSYNHIF ILILCLCLRS SSAFTNLNTL SFEESLSPLF GDANLVRSPD DLSVRLLLDR  60
   61 YTGSGFISSN MYQHGFYSSM IKLPADYTAG VVVAFYTSNG DVFEKTHDEL DIEFLGNIKG 120
  121 KPWRFQTNLY GNGSTHRGRE ERYRLWFDPS KEFHRYSILW TPHKIIFWVD DVPIREVIRN 180
  181 DAMGADYPAK PMALYATIWD ASDWATSGGK YKANYKFAPF VAEFKSFSLD GCSVDPIQEV 240
  241 PMDCSDSVDF LESQDYSSIN SHQRAAMRRF RQRFMYYSYC YDTLRYPEPL PECVIVPAEK 300
  301 DRFKETGRLK FGGTEARERR RNRRQQRRPE IEIESDPDDR KLL

[Run NCBI BLAST on this sequence.]

Detection Method: PSI-BLAST
Confidence: 69.39794
Match: 1umzA
Description: Xyloglucan endotransglycosylase in complex with the xyloglucan nonasaccharide XLLG.
Matching Structure (courtesy of the PDB):

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle