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View Structure Prediction Details

Protein: XTH29_ARATH
Organism: Arabidopsis thaliana
Length: 357 amino acids
Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16



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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for XTH29_ARATH.

Description E-value Query
Range
Subject
Range
gi|2832627, gi|7... - pir||T05036 xyloglucan endo-1,4-beta-D-glucanase (EC 3.2.1.-) F13C5.160 - Arabidopsis thaliana, gi|7...
315.0 [0..1] [357..1]

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Predicted Domain #1
Region A:
Residues: [1-357]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MRDSIYLLWI DNRLVVIIMM VMMVSCRCVL GLENINPIFF DEGLSHLFGE GNLIRSPDDR  60
   61 SVRLLLDKYT GSGFISSSMY QHGFFSSLIK LPGAYTAGIV VAFYTSNGDV FVKDHDELDI 120
  121 EFLGNLEGKP WRFQTNMYGN GSTNRGREER YRLWFDPSKE FHRYSILWTP TKIIFWVDDV 180
  181 PIREILRKEE MNGDYPQKPM SLYATIWDAS SWATSGGKFG VDYTFSPFVS EFKDIALDGC 240
  241 NVSDSFPGEN NNNNIGNYNN INCSVSDQFL MSNDYSTISP KQATAMRRFR ERYMYYSYCY 300
  301 DTIRYSVPPP ECVIVTAEKN RFRDTGRLKF GGSHPKVHKA RKKRRRNRST PVVSADL

[Run NCBI BLAST on this sequence.]

Detection Method: PSI-BLAST
Confidence: 73.69897
Match: 1umzA
Description: Xyloglucan endotransglycosylase in complex with the xyloglucan nonasaccharide XLLG.
Matching Structure (courtesy of the PDB):

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle