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View Structure Prediction Details

Protein: XTH27_ARATH
Organism: Arabidopsis thaliana
Length: 333 amino acids
Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16



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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for XTH27_ARATH.

Description E-value Query
Range
Subject
Range
gi|5533313 - gi|5533313|gb|AAD45125.1|AF163821_1 endoxyloglucan transferase [Arabidopsis thaliana]
325.0 [0..1] [333..1]

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Predicted Domain #1
Region A:
Residues: [1-333]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 METLSRLLVF MSLFSGLVSG FALQNLPITS FEESYTQLFG DKNLFVHQDG KSVRLTLDER  60
   61 TGSGFVSNDY YLHGFFSASI KLPSDYTAGV VVAFYMSNGD MYEKNHDEID FEFLGNIREK 120
  121 EWRVQTNIYG NGSTHSGREE RYNLWFDPTE DFHQYSILWS DSHIIFFVDN VPIREVKRTA 180
  181 EMGGHFPSKP MSLYTTIWDG SKWATNGGKY GVNYKYAPYI ARFSDLVLHG CPVDPIEQFP 240
  241 RCDEGAAEDM RAAQEITPSQ RSKMDVFRRR LMTYSYCYDR ARYNVALSEC VVNPAEAQRL 300
  301 RVYDPVRFGG IPRRHRNGKH RSKRSRVDGT ESI

[Run NCBI BLAST on this sequence.]

Detection Method: PSI-BLAST
Confidence: 70.69897
Match: 1umzA
Description: Xyloglucan endotransglycosylase in complex with the xyloglucan nonasaccharide XLLG.
Matching Structure (courtesy of the PDB):

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle