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View Structure Prediction Details

Protein: XTH25_ARATH
Organism: Arabidopsis thaliana
Length: 284 amino acids
Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16



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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for XTH25_ARATH.

Description E-value Query
Range
Subject
Range
gi|1244752, gi|2... - pir||S71222 xyloglucan endo-1,4-beta-D-glucanase (EC 3.2.1.-) XTR-3 - Arabidopsis thaliana (fragment...
363.0 [0..8] [284..1]

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Predicted Domain #1
Region A:
Residues: [1-284]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MDRSTFILSL LFTLTVSTTT LFSPVFAGTF DTEFDITWGD GRGKVLNNGE LLTLSLDRAS  60
   61 GSGFQTKKEY LFGKIDMQLK LVPGNSAGTV TAYYLKSKGD TWDEIDFEFL GNLTGDPYTM 120
  121 HTNVYTQGKG DREQQFHLWF DPTADFHTYS VLWNPHHIVF MVDDIPVREF KNLQHMGIQY 180
  181 PKLQPMRLYS SLWNADQWAT RGGLVKTDWS KAPFTASYRN FRADACVSSG GRSSCPAGSP 240
  241 RWFSQRLDLT AEDKMRVVQR KYMIYNYCTD TKRFPQGFPK ECRH

[Run NCBI BLAST on this sequence.]

Detection Method: PSI-BLAST
Confidence: 91.522879
Match: 1umzA
Description: Xyloglucan endotransglycosylase in complex with the xyloglucan nonasaccharide XLLG.
Matching Structure (courtesy of the PDB):

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle