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View Structure Prediction Details

Protein: XTH24_ARATH
Organism: Arabidopsis thaliana
Length: 269 amino acids
Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16



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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for XTH24_ARATH.

Description E-value Query
Range
Subject
Range
gi|21553999 - gi|21553999|gb|AAM63080.1| xyloglucan endo-1,4-beta-D-glucanase precursor [Arabidopsis thaliana]
334.0 [0..1] [269..1]

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Predicted Domain #1
Region A:
Residues: [1-269]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MSPFKIFFFT TLLVAAFSVS AADFNTDVNV AWGNGRGKIL NNGQLLTLSL DKSSGSGFQS  60
   61 KTEYLFGKID MQIKLVPGNS AGTVTTFYLK SEGSTWDEID FEFLGNMSGD PYTLHTNVYT 120
  121 QGKGDKEQQF HLWFDPTANF HTYSILWNPQ RIILTVDDTP IREFKNYESL GVLFPKNKPM 180
  181 RMYASLWNAD DWATRGGLVK TDWSKAPFMA SYRNIKIDSK PNSNWYTQEM DSTSQARLKW 240
  241 VQKNYMIYNY CTDHRRFPQG APKECTTSS

[Run NCBI BLAST on this sequence.]

Detection Method: PSI-BLAST
Confidence: 81.39794
Match: 1umzA
Description: Xyloglucan endotransglycosylase in complex with the xyloglucan nonasaccharide XLLG.
Matching Structure (courtesy of the PDB):

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle