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View Structure Prediction Details

Protein: XTH22_ARATH
Organism: Arabidopsis thaliana
Length: 284 amino acids
Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16



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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for XTH22_ARATH.

Description E-value Query
Range
Subject
Range
gi|29500899, gi|... - gi|29500899|emb|CAD87533.1| putative xyloglucan endotransglycosylase [Cucumis sativus], gi|29500891|...
347.0 [0..2] [281..3]

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Predicted Domain #1
Region A:
Residues: [1-284]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MAITYLLPLF LSLIITSSVS ANFQRDVEIT WGDGRGQIKN NGELLTLSLD KSSGSGFQSK  60
   61 NEYLFGKVSM QMKLVPGNSA GTVTTLYLKS PGTTWDEIDF EFLGNSSGEP YTLHTNVYTQ 120
  121 GKGDKEQQFK LWFDPTANFH TYTILWNPQR IIFTVDGTPI REFKNMESLG TLFPKNKPMR 180
  181 MYSSLWNADD WATRGGLVKT DWSKAPFTAS YRGFQQEACV WSNGKSSCPN ASKQGTTTGS 240
  241 WLSQELDSTA QQRMRWVQRN YMIYNYCTDA KRFPQGLPKE CLAA

[Run NCBI BLAST on this sequence.]

Detection Method: PSI-BLAST
Confidence: 90.69897
Match: 1umzA
Description: Xyloglucan endotransglycosylase in complex with the xyloglucan nonasaccharide XLLG.
Matching Structure (courtesy of the PDB):

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle