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View Structure Prediction Details

Protein: XTH20_ARATH
Organism: Arabidopsis thaliana
Length: 282 amino acids
Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16



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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for XTH20_ARATH.

Description E-value Query
Range
Subject
Range
gi|29500899, gi|... - gi|29500899|emb|CAD87533.1| putative xyloglucan endotransglycosylase [Cucumis sativus], gi|29500891|...
344.0 [0..6] [282..1]

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Predicted Domain #1
Region A:
Residues: [1-282]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MVSFCGRRFA FLIIFLFAAQ YERVYAGSFH KDVQIHWGDG RGKILDNVGN LLSLSLDKFS  60
   61 GSGFQSHQEF LYGKVEVQMK LVPGNSAGTV TTFYLKSPGT TWDEIDFEFL GNISGHPYTL 120
  121 HTNVYTKGTG DKEQQFHLWF DPTVDFHTYC IIWNPQRVIF TIDGIPIREF KNSEALGVPF 180
  181 PKHQPMRLYA SLWEAEHWAT RGGLEKTDWS KAPFTAFYRN YNVDACVWSN GKSSCSANSS 240
  241 WFTQVLDFKG KNRVKWAQRK YMVYNYCTDK KRFPQGAPPE CS

[Run NCBI BLAST on this sequence.]

Detection Method: PSI-BLAST
Confidence: 87.0
Match: 1umzA
Description: Xyloglucan endotransglycosylase in complex with the xyloglucan nonasaccharide XLLG.
Matching Structure (courtesy of the PDB):

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle