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View Structure Prediction Details

Protein: XTH19_ARATH
Organism: Arabidopsis thaliana
Length: 277 amino acids
Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16



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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for XTH19_ARATH.

Description E-value Query
Range
Subject
Range
gi|29500899, gi|... - gi|29500899|emb|CAD87533.1| putative xyloglucan endotransglycosylase [Cucumis sativus], gi|29500891|...
351.0 [0..1] [277..1]

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Predicted Domain #1
Region A:
Residues: [1-277]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MKSFTFLILF LFAAQSISVY AGSFHKDVKI HWGDGRGKIH DNQGKLLSLS LDKSSGSGFQ  60
   61 SNQEFLYGKA EVQMKLVPGN SAGTVTTFYL KSPGTTWDEI DFEFLGNISG HPYTLHTNVY 120
  121 TKGSGDKEQQ FHLWFDPTAN FHTYCITWNP QRIIFTVDGI PIREFMNAES RGVPFPTKQP 180
  181 MRLYASLWEA EHWATRGGLE KTDWSKAPFT AYYRNYNVEG CVWVNGKSVC PANSQWFTQK 240
  241 LDSNGQTRMK GVQSKYMVYN YCSDKKRFPR GVPPECS

[Run NCBI BLAST on this sequence.]

Detection Method: PSI-BLAST
Confidence: 84.0
Match: 1umzA
Description: Xyloglucan endotransglycosylase in complex with the xyloglucan nonasaccharide XLLG.
Matching Structure (courtesy of the PDB):

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle