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View Structure Prediction Details

Protein: XTH18_ARATH
Organism: Arabidopsis thaliana
Length: 282 amino acids
Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16



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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for XTH18_ARATH.

Description E-value Query
Range
Subject
Range
XTH25_ARATH - Probable xyloglucan endotransglucosylase/hydrolase protein 25 OS=Arabidopsis thaliana GN=XTH25 PE=2 ...
343.0 [0..2] [281..3]

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Predicted Domain #1
Region A:
Residues: [1-282]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MKLSCGTSFA FLIMFLFAAQ SMHVYAGSFH KDVQIHWGDG RGKVRDRDGK LLSLSLDKSS  60
   61 GSGFQSNQEF LYGKAEVQMK LVPGNSAGTV TTFYLKSPGT TWDEIDFEFL GNLSGHPYTL 120
  121 HTNVYTKGSG DKEQQFHLWF DPTVNFHTYC ITWNPQRIIF TVDGIPIREF KNSESIGVPF 180
  181 PTKQPMRLYA SLWEAEHWAT RGGLEKTDWS KAPFTAFYRN YNVEGCVWAN GKSSCPANSS 240
  241 WFTQQLDSNG QTRMKGVQSK YMVYNYCNDK RRFPRGVPVE CS

[Run NCBI BLAST on this sequence.]

Detection Method: PSI-BLAST
Confidence: 86.30103
Match: 1umzA
Description: Xyloglucan endotransglycosylase in complex with the xyloglucan nonasaccharide XLLG.
Matching Structure (courtesy of the PDB):

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle