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View Structure Prediction Details

Protein: XTH17_ARATH
Organism: Arabidopsis thaliana
Length: 282 amino acids
Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16



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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for XTH17_ARATH.

Description E-value Query
Range
Subject
Range
XTH20_ARATH - Xyloglucan endotransglucosylase/hydrolase protein 20 OS=Arabidopsis thaliana GN=XTH20 PE=2 SV=1
338.0 [0..1] [282..1]

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Predicted Domain #1
Region A:
Residues: [1-282]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MKLSCGTSFA FLLLFLLAAQ SVHVYAGSFH KDVQIHWGDG RGKIHDRDGK LLSLSLDKSS  60
   61 GSGFQSNQEF LYGKAEVQMK LVPGNSAGTV TTFYLKSPGT TWDEIDFEFL GNISGHPYTL 120
  121 HTNVYTKGTG DKEQQFHLWF DPTVNFHTYC ITWNPQRIIF TVDGIPIREF KNPEAIGVPF 180
  181 PTRQPMRLYA SLWEAEHWAT RGGLEKTDWS KAPFTAFYRN YNVDGCVWAN GKSSCSANSP 240
  241 WFTQKLDSNG QTRMKGVQSK YMIYNYCTDK RRFPRGVPAE CT

[Run NCBI BLAST on this sequence.]

Detection Method: PSI-BLAST
Confidence: 83.39794
Match: 1umzA
Description: Xyloglucan endotransglycosylase in complex with the xyloglucan nonasaccharide XLLG.
Matching Structure (courtesy of the PDB):

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle