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View Structure Prediction Details

Protein: XTH16_ARATH
Organism: Arabidopsis thaliana
Length: 291 amino acids
Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16



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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for XTH16_ARATH.

Description E-value Query
Range
Subject
Range
gi|21536689 - gi|21536689|gb|AAM61021.1| xyloglucan endotransglycosylase, putative [Arabidopsis thaliana]
367.0 [0..1] [291..1]

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Predicted Domain #1
Region A:
Residues: [1-291]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MGRILNRTVL MTLLVVTMAG TAFSGSFNEE FDLTWGEHRG KIFSGGKMLS LSLDRVSGSG  60
   61 FKSKKEYLFG RIDMQLKLVA GNSAGTVTAY YLSSEGPTHD EIDFEFLGNE TGKPYVLHTN 120
  121 VFAQGKGNRE QQFYLWFDPT KNFHTYSLVW RPQHIIFMVD NVPIRVFNNA EQLGVPFPKN 180
  181 QPMKIYSSLW NADDWATRGG LVKTDWSKAP FTAYYRGFNA AACTVSSGSS FCDPKFKSSF 240
  241 TNGESQVANE LNAYGRRRLR WVQKYFMIYD YCSDLKRFPQ GFPPECRKSR V

[Run NCBI BLAST on this sequence.]

Detection Method: PSI-BLAST
Confidence: 93.522879
Match: 1umzA
Description: Xyloglucan endotransglycosylase in complex with the xyloglucan nonasaccharide XLLG.
Matching Structure (courtesy of the PDB):

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle