| Protein: | WRKY1_ARATH |
| Organism: | Arabidopsis thaliana |
| Length: | 487 amino acids |
| Reference: | Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16 |
Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for WRKY1_ARATH.
| Description | E-value | Query Range |
Subject Range |
|
|
343.0 | [0..1] | [487..1] |
|
|
266.0 | [0..16] | [484..223] |
|
|
263.0 | [0..16] | [484..237] |
|
|
250.0 | [0..47] | [486..203] |
|
|
245.0 | [0..10] | [409..180] |
|
|
245.0 | [0..58] | [480..227] |
|
Region A: Residues: [1-81] |
1 11 21 31 41 51
| | | | | |
1 MAEVGKVLAS DMELDHSNET KAVDDVVATT DKAEVIPVAV TRTETVVESL ESTDCKELEK 60
61 LVPHTVASQS EVDVASPVSE K
|
| Detection Method: |  |
Shown below are all of our de novo (Rosetta) predictions for this domain.
Click here to view only most confident match.
Found no structure predictions for this domain.
|
Region A: Residues: [82-179] |
1 11 21 31 41 51
| | | | | |
1 APKVSESSGA LSLQSGSEGN SPFIREKVME DGYNWRKYGQ KLVKGNEFVR SYYRCTHPNC 60
61 KAKKQLERSA GGQVVDTVYF GEHDHPKPLA GAVPINQD
|
| Detection Method: | |
| Confidence: | 4.95 |
| Match: | 1wj2A |
| Description: | Solution Structure of the C-terminal WRKY Domain of AtWRKY4 |
Matching Structure (courtesy of the PDB): |
|
|
Region A: Residues: [180-268] |
1 11 21 31 41 51
| | | | | |
1 KRSDVFTAVS KGEQRIDIVS LIYKLCIVSY DIMFVEKTSG SSVQTLRQTE PPKIHGGLHV 60
61 SVIPPADDVK TDISQSSRIT GDNTHKDYN
|
| Detection Method: | |
Shown below are all of our de novo (Rosetta) predictions for this domain.
Click here to view only most confident match.
| MCM Score |
SCOP Match |
SCOP Description | ||
| View | Download | 0.803 | a.7.6 | Ribosomal protein S20 |
| View | Download | 0.633 | a.7.6 | Ribosomal protein S20 |
| View | Download | 0.527 | a.24.13 | Domain of the SRP/SRP receptor G-proteins |
| View | Download | 0.476 | a.177.1 | Sigma2 domain of RNA polymerase sigma factors |
| View | Download | 0.421 | a.230.1 | Description not found. |
| View | Download | 0.409 | a.4.9 | Polynucleotide phosphorylase/guanosine pentaphosphate synthase (PNPase/GPSI), domain 3 |
| View | Download | 0.409 | a.4.9 | Polynucleotide phosphorylase/guanosine pentaphosphate synthase (PNPase/GPSI), domain 3 |
| View | Download | 0.383 | a.64.1 | Saposin |
| View | Download | 0.383 | a.64.1 | Saposin |
| View | Download | 0.365 | a.8.2 | Plasmid maintenance system epsilon/zeta, antidote epsilon subunit |
| View | Download | 0.305 | a.7.8 | GAT domain |
| View | Download | 0.261 | d.52.1 | Alpha-lytic protease prodomain |
| View | Download | 0.242 | d.52.1 | Alpha-lytic protease prodomain |
| View | Download | 0.226 | a.100.1 | 6-phosphogluconate dehydrogenase C-terminal domain-like |
| View | Download | 0.207 | c.47.1 | Thioredoxin-like |
|
Region A: Residues: [269-369] |
1 11 21 31 41 51
| | | | | |
1 SPTAKRRKKG GNIELSPVER STNDSRIVVH TQTLFDIVND GYRWRKYGQK SVKGSPYPRS 60
61 YYRCSSPGCP VKKHVERSSH DTKLLITTYE GKHDHDMPPG R
|
| Detection Method: | |
| Confidence: | 25.045757 |
| Match: | 2aydA |
| Description: | No description for 2aydA was found. |
|
Region A: Residues: [370-487] |
1 11 21 31 41 51
| | | | | |
1 VVTHNNMLDS EVDDKEGDAN KTPQSSTLQS ITKDQHVEDH LRKKTKTNGF EKSLDQGPVL 60
61 DEKLKEEIKE RSDANKDHAA NHAKPEAKSD DKTTVCQEKA VGTLESEEQK PKTEPAQS
|
| Detection Method: | |
Shown below are all of our de novo (Rosetta) predictions for this domain.
Click here to view only most confident match.
Found no structure predictions for this domain.
