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View Structure Prediction Details

Protein: VATE1_ARATH
Organism: Arabidopsis thaliana
Length: 230 amino acids
Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16



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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for VATE1_ARATH.

Description E-value Query
Range
Subject
Range
gi|25528534, gi|... - gi|6692094|gb|AAF24559.1|AC007764_1 F22C12.4 [Arabidopsis thaliana], pir||C96666 protein F22C12.4 [i...
215.0 [0..1] [219..1]

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Predicted Domain #1
Region A:
Residues: [1-230]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MNDGDVSRQI QQMVRFIRQE AEEKANEISV SAEEEFNIEK LQLVEAEKKK IRQDYEKKEK  60
   61 QADVRKKIDY SMQLNASRIK VLQAQDDIVN AMKDQAAKDL LNVSRDEYAY KQLLKDLIVQ 120
  121 CLLRLKEPSV LLRCREEDLG LVEAVLDDAK EEYAGKAKVH APEVAVDTKI FLPPPPKSND 180
  181 PHGLHCSGGV VLASRDGKIV CENTLDARLD VAFRMKLPVI RKSLFGQVTA 

[Run NCBI BLAST on this sequence.]

Detection Method: PSI-BLAST
Confidence: 17.522879
Match: 2dm9A
Description: No description for 2dm9A was found.

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle