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View Structure Prediction Details

Protein: VA727_ARATH
Organism: Arabidopsis thaliana
Length: 240 amino acids
Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16



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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for VA727_ARATH.

Description E-value Query
Range
Subject
Range
gi|45736098, gi|... - gi|51965098|ref|XP_507333.1| PREDICTED P0562A06.8 gene product [Oryza sativa (japonica cultivar-grou...
222.0 [0..2] [238..4]

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Predicted Domain #1
Region A:
Residues: [1-240]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MSQKGLIYSF VAKGTVVLAE HTPYSGNFST IAVQCLQKLP TNSSKYTYSC DGHTFNFLVD  60
   61 NGFVFLVVAD ESTGRSVPFV FLERVKEDFK KRYEASIKND ERHPLADEDE DDDLFGDRFS 120
  121 VAYNLDREFG PILKEHMQYC MSHPEEMSKL SKLKAQITEV KGIMMDNIEK VLDRGEKIEL 180
  181 LVDKTENLQF QADSFQRQGR QLRRKMWLQS LQMKLMVAGA VFSFILIVWV VACGGFKCSS 240
  241 

[Run NCBI BLAST on this sequence.]

Detection Method: PSI-BLAST
Confidence: 32.522879
Match: 2nupC
Description: No description for 2nupC was found.

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle