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View Structure Prediction Details

Protein: GCAL2_ARATH
Organism: Arabidopsis thaliana
Length: 256 amino acids
Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16



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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for GCAL2_ARATH.

Description E-value Query
Range
Subject
Range
gi|21537242 - gi|21537242|gb|AAM61583.1| unknown [Arabidopsis thaliana]
180.0 [0..22] [251..2]

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Predicted Domain #1
Region A:
Residues: [1-256]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MATSLARISK RSITSAVSSN LIRRYFAAEA VAVATTETPK PKSQVTPSPD RVKWDYRGQR  60
   61 QIIPLGQWLP KVAVDAYVAP NVVLAGQVTV WDGSSVWNGA VLRGDLNKIT VGFCSNVQER 120
  121 CVVHAAWSSP TGLPAQTLID RYVTVGAYSL LRSCTIEPEC IIGQHSILME GSLVETRSIL 180
  181 EAGSVLPPGR RIPSGELWGG NPARFIRTLT NEETLEIPKL AVAINHLSGD YFSEFLPYST 240
  241 IYLEVEKFKK SLGIAI

[Run NCBI BLAST on this sequence.]

Detection Method: PSI-BLAST
Confidence: 39.69897
Match: 1xhdA
Description: X-ray crystal structure of putative acetyltransferase, product of BC4754 gene [Bacillus cereus]
Matching Structure (courtesy of the PDB):

Predicted functions:

Term Confidence Notes
catalytic activity 2.59855937987599 bayes_pls_golite062009
transferase activity 1.25048371841184 bayes_pls_golite062009
transferase activity, transferring acyl groups 0.886009567107207 bayes_pls_golite062009
transferase activity, transferring acyl groups other than amino-acyl groups 0.876088267537604 bayes_pls_golite062009
acyltransferase activity 0.870444687691191 bayes_pls_golite062009

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle