Protein: | TRBP2_ARATH |
Organism: | Arabidopsis thaliana |
Length: | 475 amino acids |
Reference: | Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16 |
Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for TRBP2_ARATH.
Description | E-value | Query Range |
Subject Range |
|
507.0 | [0..1] | [475..1] |
|
474.0 | [0..3] | [475..13] |
|
474.0 | [0..26] | [475..32] |
|
464.0 | [0..70] | [474..4] |
|
461.0 | [0..16] | [474..7] |
|
461.0 | [0..82] | [475..1] |
|
460.0 | [0..64] | [473..1] |
|
460.0 | [0..68] | [475..1] |
|
459.0 | [0..75] | [474..5] |
Region A: Residues: [1-84] |
1 11 21 31 41 51 | | | | | | 1 MATASTAATF RPSSVSASSE LTHLRSPSKL PKFTPLPSAR SRSSSSFSVS CTIAKDPAVV 60 61 MADSEKIKAA GSDPTMWQRP DSFG |
Shown below are all of our de novo (Rosetta) predictions for this domain.
Click here to view only most confident match.
MCM Score |
SCOP Match |
SCOP Description | ||
View | Download | 0.398 | a.275.1 | Description not found. |
View | Download | 0.350 | a.39.4 | Hypothetical protein MTH865 |
View | Download | 0.319 | g.14.1 | Kringle-like |
View | Download | 0.304 | a.3.1 | Cytochrome c |
View | Download | 0.304 | a.3.1 | Cytochrome c |
View | Download | 0.304 | a.3.1 | Cytochrome c |
View | Download | 0.278 | a.3.1 | Cytochrome c |
View | Download | 0.277 | a.181.1 | Antibiotic binding domain of TipA-like multidrug resistance regulators |
View | Download | 0.265 | a.52.1 | Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumin |
View | Download | 0.247 | d.52.8 | Description not found. |
Region A: Residues: [85-475] |
1 11 21 31 41 51 | | | | | | 1 RFGKFGGKYV PETLMHALSE LETAFYSLAT DEDFQRELAE ILKDYVGRES PLYFAERLTE 60 61 HYRRENGEGP LIYLKREDLN HTGAHKINNA VAQALLAKRL GKKRIIAETG AGQHGVATAT 120 121 VCARFGLQCI IYMGAQDMER QALNVFRMRL LGAEVRGVHS GTATLKDATS EAIRDWVTNV 180 181 ETTHYILGSV AGPHPYPMMV RDFHAVIGKE TRKQAMEKWG GKPDVLVACV GGGSNAMGLF 240 241 HEFVDDTEVR MIGVEAAGFG LDSGKHAATL TKGDVGVLHG AMSYLLQDDD GQIIEPHSIS 300 301 AGLDYPGVGP EHSFLKDVGR AEYFSVTDEE ALEAFKRVSR LEGIIPALET SHALAHLEKL 360 361 CPTLPDGARV VLNFSGRGDK DVQTAIKYLE V |
Detection Method: | |
Confidence: | 125.0 |
Match: | 1v8zA |
Description: | X-ray crystal structure of the Tryptophan Synthase b2 Subunit from Hyperthermophile, Pyrococcus furiosus |
Matching Structure (courtesy of the PDB): |