YRC Logo
PROTEIN SEARCH:
Descriptions Names[Advanced Search]

View Structure Prediction Details

Protein: CML12_ARATH
Organism: Arabidopsis thaliana
Length: 324 amino acids
Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16



[What does the above image mean?]


[Show Ginzu Version Information]


Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for CML12_ARATH.

Description E-value Query
Range
Subject
Range
gi|598067 - gi|598067|gb|AAC37419.1| calmodulin-related protein
253.0 [0..1] [324..1]

Back

Predicted Domain #1
Region A:
Residues: [1-165]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MADKLTDDQI TEYRESFRLF DKNGDGSITK KELGTMMRSI GEKPTKADLQ DLMNEADLDG  60
   61 DGTIDFPEFL CVMAKNQGHD QAPRHTKKTM ADKLTDDQIT EYRESFRLFD KNGDGSITKK 120
  121 ELRTVMFSLG KNRTKADLQD MMNEVDLDGD GTIDFPEFLY LMAKN

[Run NCBI BLAST on this sequence.]

Detection Method: PSI-BLAST
Confidence: 38.154902
Match: 2f2oA
Description: Structure of calmodulin bound to a calcineurin peptide: a new way of making an old binding mode
Matching Structure (courtesy of the PDB):

Predicted Domain #2
Region A:
Residues: [166-324]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 QGHDQAPRHT KKTMVDYQLT DDQILEFREA FRVFDKNGDG YITVNELRTT MRSLGETQTK  60
   61 AELQDMINEA DADGDGTISF SEFVCVMTGK MIDTQSKKET YRVVNQGQGQ VQRHTRNDRA 120
  121 GGTNWERDIA VGVASNIIAS PISDFMKDRF KDLFEALLS

[Run NCBI BLAST on this sequence.]

Detection Method: PSI-BLAST
Confidence: 35.39794
Match: 1y0vH
Description: Crystal structure of anthrax edema factor (EF) in complex with calmodulin and pyrophosphate
Matching Structure (courtesy of the PDB):

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle