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View Structure Prediction Details

Protein: TBG2_ARATH
Organism: Arabidopsis thaliana
Length: 474 amino acids
Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16



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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for TBG2_ARATH.

Description E-value Query
Range
Subject
Range
gi|114583451 - gi|114583451|ref|XP_526036.2| PREDICTED: similar to alpha-tubulin isotype M-alpha-6 [Pan troglodytes...
606.0 [0..2] [454..241]

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Predicted Domain #1
Region A:
Residues: [1-474]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MPREIITLQV GQCGNQIGME FWKQLCLEHG ISKDGILEDF ATQGGDRKDV FFYQADDQHY  60
   61 IPRALLIDLE PRVINGIQNG EYRNLYNHEN IFLSDHGGGA GNNWASGYHQ GKGVEEEIMD 120
  121 MIDREADGSD SLEGFVLCHS IAGGTGSGMG SYLLETLNDR YSKKLVQTYS VFPNQMETSD 180
  181 VVVQPYNSLL TLKRLTLNAD CVVVLDNTAL NRIAVERLHL TNPTFAQTNS LVSTVMSAST 240
  241 TTLRYPGYMN NDLVGLLASL IPTPRCHFLM TGYTPLTVER QANVIRKTTV LDVMRRLLQT 300
  301 KNIMVSSYAR NKEASQAKYI SILNIIQGEV DPTQVHESLQ RIRERKLVNF IDWGPASIQV 360
  361 ALSKKSPYVQ TSHRVSGLML ASHTSIRHLF SRCLSQYDKL RKKQAFLDNY RKFPMFADND 420
  421 LSEFDESRDI IESLVDEYKA CESPDYIKWG MEDPGQLMTG EGNASGVADP KLAF

[Run NCBI BLAST on this sequence.]

Detection Method: PSI-BLAST
Confidence: 149.0
Match: 1z5vA
Description: Crystal structure of human gamma-tubulin bound to GTPgammaS
Matching Structure (courtesy of the PDB):

YRC Informatics Platform - Version 3.0
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