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View Structure Prediction Details

Protein: TBB1_ARATH
Organism: Arabidopsis thaliana
Length: 447 amino acids
Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16



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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for TBB1_ARATH.

Description E-value Query
Range
Subject
Range
gi|48095525 - gi|48095525|ref|XP_392313.1| PREDICTED: similar to -Tubulin at 56D CG9277-PB, isoform B [Apis mellif...
610.0 [0..1] [446..1]

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Predicted Domain #1
Region A:
Residues: [1-447]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MREILHVQGG QCGNQIGSKF WEVICDEHGV DPTGRYNGDS ADLQLERINV YYNEASGGRY  60
   61 VPRAVLMDLE PGTMDSIRSG PYGQIFRPDN FVFGQSGAGN NWAKGHYTEG AELIDAVLDV 120
  121 VRKEAENCDC LQGFQVCHSL GGGTGSGMGT LLISKIREEY PDRMMLTFSV FPSPKVSDTV 180
  181 VEPYNATLSV HQLVENADEC MVLDNEALYD ICFRTLKLST PSFGDLNHLI SATMSGVTCS 240
  241 LRFPGQLNSD LRKLAVNLIP FPRLHFFMVG FAPLTSRGSQ QYISLTVPEL TQQMWDAKNM 300
  301 MCAADPRHGR YLTASAMFRG KMSTKEVDEQ ILNVQNKNSS YFVEWIPNNV KSSVCDIPPT 360
  361 GIKMASTFVG NSTSIQEMFR RVSEQFTAMF RRKAFLHWYT GEGMDEMEFT EAESNMNDLV 420
  421 SEYQQYQDAT ADEEDEYDEE EEQVYES

[Run NCBI BLAST on this sequence.]

Detection Method: PSI-BLAST
Confidence: 171.0
Match: 1ffxB
Description: Tubulin:stathmin-like domain complex
Matching Structure (courtesy of the PDB):

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle