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View Structure Prediction Details

Protein: SUVH7_ARATH
Organism: Arabidopsis thaliana
Length: 693 amino acids
Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16



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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for SUVH7_ARATH.

Description E-value Query
Range
Subject
Range
gi|9665056, gi|2... - gi|9665056|gb|AAF97258.1|AC034106_1 Contains a DNA binding domain with preference for A/T rich regio...
573.0 [0..1] [672..1]

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Predicted Domain #1
Region A:
Residues: [1-206]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MDKSIPIKAI PVACVRPDLV DDVTKNTSTI PTMVSPVLTN MPSATSPLLM VPPLRTIWPS  60
   61 NKEWYDGDAG PSSTGPIKRE ASDNTNDTAH NTFAPPPEMV IPLITIRPSD DSSNYSCDAG 120
  121 AGPSTGPVKR GRGRPKGSKN STPTEPKKPK VYDPNSLKVT SRGNFDSEIT EAETETGNQE 180
  181 IVDSVMMRFD AVRRRLCQIN HPEDIL

[Run NCBI BLAST on this sequence.]

Detection Method: MSA

Shown below is our most confident prediction for this domain.
Click here to view all matches.

Found no confident structure predictions for this domain.

Predicted Domain #2
Region A:
Residues: [207-394]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 TTASGNCTKM GVKTNTRRRI GAVPGIHVGD IFYYWGEMCL VGLHKSNYGG IDFFTAAESA  60
   61 VEGHAAMCVV TAGQYDGETE GLDTLIYSGQ GGTDVYGNAR DQEMKGGNLA LEASVSKGND 120
  121 VRVVRGVIHP HENNQKIYIY DGMYLVSKFW TVTGKSGFKE FRFKLVRKPN QPPAYAIWKT 180
  181 VENLRNHD

[Run NCBI BLAST on this sequence.]

Detection Method: Pfam
Confidence: 40.958607
Match: PF02182.8
Description: No description for PF02182.8 was found.

Shown below is our most confident prediction for this domain.
Click here to view all matches.

Found no confident structure predictions for this domain.

Predicted Domain #3
Region A:
Residues: [395-693]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 LIDSRQGFIL EDLSFGAELL RVPLVNEVDE DDKTIPEDFD YIPSQCHSGM MTHEFHFDRQ  60
   61 SLGCQNCRHQ PCMHQNCTCV QRNGDLLPYH NNILVCRKPL IYECGGSCPC PDHCPTRLVQ 120
  121 TGLKLHLEVF KTRNCGWGLR SWDPIRAGTF ICEFAGLRKT KEEVEEDDDY LFDTSKIYQR 180
  181 FRWNYEPELL LEDSWEQVSE FINLPTQVLI SAKEKGNVGR FMNHSCSPNV FWQPIEYENR 240
  241 GDVYLLIGLF AMKHIPPMTE LTYDYGVSCV ERSEEDEVLL YKGKKTCLCG SVKCRGSFT

[Run NCBI BLAST on this sequence.]

Detection Method: PSI-BLAST
Confidence: 70.154902
Match: 2o8jA
Description: No description for 2o8jA was found.

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle