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View Structure Prediction Details

Protein: SUVH4_ARATH
Organism: Arabidopsis thaliana
Length: 624 amino acids
Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16



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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for SUVH4_ARATH.

Description E-value Query
Range
Subject
Range
gi|27502110 - gi|27502110|gb|AAO17392.1| SET domain histone methyltransferase SUVH4 [Arabidopsis thaliana]
549.0 [0..1] [624..1]

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Predicted Domain #1
Region A:
Residues: [1-137]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MAGKRKRANA PDQTERRSSV RVQKVRQKAL DEKARLVQER VKLLSDRKSE ICVDDTELHE  60
   61 KEEENVDGSP KRRSPPKLTA MQKGKQKLSV SLNGKDVNLE PHLKVTKCLR LFNKQYLLCV 120
  121 QAKLSRPDLK GVTEMIK

[Run NCBI BLAST on this sequence.]

Detection Method: PSI-BLAST
Confidence: 7.69897
Match: 2e6sA
Description: No description for 2e6sA was found.

Predicted Domain #2
Region A:
Residues: [138-302]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 AKAILYPRKI IGDLPGIDVG HRFFSRAEMC AVGFHNHWLN GIDYMSMEYE KEYSNYKLPL  60
   61 AVSIVMSGQY EDDLDNADTV TYTGQGGHNL TGNKRQIKDQ LLERGNLALK HCCEYNVPVR 120
  121 VTRGHNCKSS YTKRVYTYDG LYKVEKFWAQ KGVSGFTVYK YRLKR

[Run NCBI BLAST on this sequence.]

Detection Method: Pfam
Confidence: 46.886057
Match: PF02182.8
Description: No description for PF02182.8 was found.

Shown below is our most confident prediction for this domain.
Click here to view all matches.

Found no confident structure predictions for this domain.

Predicted Domain #3
Region A:
Residues: [303-624]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 LEGQPELTTD QVNFVAGRIP TSTSEIEGLV CEDISGGLEF KGIPATNRVD DSPVSPTSGF  60
   61 TYIKSLIIEP NVIIPKSSTG CNCRGSCTDS KKCACAKLNG GNFPYVDLND GRLIESRDVV 120
  121 FECGPHCGCG PKCVNRTSQK RLRFNLEVFR SAKKGWAVRS WEYIPAGSPV CEYIGVVRRT 180
  181 ADVDTISDNE YIFEIDCQQT MQGLGGRQRR LRDVAVPMNN GVSQSSEDEN APEFCIDAGS 240
  241 TGNFARFINH SCEPNLFVQC VLSSHQDIRL ARVVLFAADN ISPMQELTYD YGYALDSVHG 300
  301 PDGKVKQLAC YCGALNCRKR LY

[Run NCBI BLAST on this sequence.]

Detection Method: PSI-BLAST
Confidence: 47.045757
Match: 2igqA
Description: No description for 2igqA was found.

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle