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View Structure Prediction Details

Protein: RS82_ARATH
Organism: Arabidopsis thaliana
Length: 210 amino acids
Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16



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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for RS82_ARATH.

Description E-value Query
Range
Subject
Range
gi|94367685 - gi|94367685|ref|XP_979270.1| PREDICTED: similar to ribosomal protein S8 [Mus musculus]
357.0 [0..1] [205..212]

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Predicted Domain #1
Region A:
Residues: [1-210]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MGISRDSIHK RRATGGKQKM WRKKRKYELG RQPANTKLSS NKTVRRIRVR GGNVKWRALR  60
   61 LDTGNFSWGS EAVTRKTRIL DVAYNASNNE LVRTQTLVKS AIVQVDAAPF KQGYLQHYGV 120
  121 DIGRKKKGEA VTTEEVKKSN HVQRKLEMRQ EGRALDSHLE EQFSSGRLLA CIASRPGQCG 180
  181 RADGYILEGK ELEFYMKKLQ KKKGKNAGAA 

[Run NCBI BLAST on this sequence.]

Detection Method: Pfam
Confidence: 111.19382
Match: PF01201.13
Description: No description for PF01201.13 was found.

Shown below is our most confident prediction for this domain.
Click here to view all matches.

Found no confident structure predictions for this domain.


YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle