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View Structure Prediction Details

Protein: RIN4_ARATH
Organism: Arabidopsis thaliana
Length: 211 amino acids
Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16



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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for RIN4_ARATH.

Description E-value Query
Range
Subject
Range
gi|9294163 - gi|9294163|dbj|BAB02065.1| unnamed protein product [Arabidopsis thaliana]
235.0 [0..1] [202..74]

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Predicted Domain #1
Region A:
Residues: [1-125]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MARSNVPKFG NWEAEENVPY TAYFDKARKT RAPGSKIMNP NDPEYNSDSQ SQAPPHPPSS  60
   61 RTKPEQVDTV RRSREHMRSR EESELKQFGD AGGSSNEAAN KRQGRASQNN SYDNKSPLHK 120
  121 NSYDG

[Run NCBI BLAST on this sequence.]

Detection Method: MSA

Shown below is our most confident prediction for this domain.
Click here to view all matches.

Found no confident structure predictions for this domain.

Predicted Domain #2
Region A:
Residues: [126-211]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 TGKSRPKPTN LRADESPEKV TVVPKFGDWD ENNPSSADGY THIFNKVREE RSSGANVSGS  60
   61 SRTPTHQSSR NPNNTSSCCC FGFGGK

[Run NCBI BLAST on this sequence.]

Detection Method: Pfam
Confidence: 8.065502
Match: PF05627.2
Description: No description for PF05627.2 was found.

Shown below is our most confident prediction for this domain.
Click here to view all matches.

Found no confident structure predictions for this domain.


YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle