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View Structure Prediction Details

Protein: RER1C_ARATH
Organism: Arabidopsis thaliana
Length: 212 amino acids
Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16



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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for RER1C_ARATH.

Description E-value Query
Range
Subject
Range
gi|7688699 - gi|7688699|gb|AAF67490.1|AF157324_1 RER1 protein [Homo sapiens]
318.0 [0..22] [210..4]

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Predicted Domain #1
Region A:
Residues: [1-212]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MESAATAVVP PAAAATTATA TDDNLQSSDS SSPADAVNRL IHAFSQRQQH LLDKTVPHVL  60
   61 YRWIACLCVV LIYIVRVYFV EGFYIITYAI GIYLLNLIIA FLSPQEDPEA SLTSGGSLPT 120
  121 RRSDEYRPFV RRLPEFKFWL SIIRAFIIGF MMTFFEVFDV PVFWPILLFY WVMLFFLTMR 180
  181 KQIQHMIKYR YVPFSFGKKQ YGKKPAPTES SE

[Run NCBI BLAST on this sequence.]

Detection Method: Pfam
Confidence: 140.585027
Match: PF03248.4
Description: No description for PF03248.4 was found.

Shown below is our most confident prediction for this domain.
Click here to view all matches.

Found no confident structure predictions for this domain.


YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle