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View Structure Prediction Details

Protein: PSK2_ARATH
Organism: Arabidopsis thaliana
Length: 87 amino acids
Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16



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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for PSK2_ARATH.

Description E-value Query
Range
Subject
Range
gi|23466407 - gi|23466407|tpg|DAA00294.1| TPA: TPA_exp: putative phytosulfokine peptide precursor [Solanum tuberos...
94.0 [0..1] [85..1]

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Predicted Domain #1
Region A:
Residues: [1-87]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MANVSALLTI ALLLCSTLMC TARPEPAISI SITTAADPCN MEKKIEGKLD DMHMVDENCG  60
   61 ADDEDCLMRR TLVAHTDYIY TQKKKHP

[Run NCBI BLAST on this sequence.]

Detection Method: Pfam
Confidence: 41.585027
Match: PF06404.3
Description: No description for PF06404.3 was found.

Shown below is our most confident prediction for this domain.
Click here to view all matches.

    MCM
Score
GO
Score
GO
Term
SCOP
Match
SCOP Description
View Download 0.847 N/A N/A a.50.1 Anaphylotoxins (complement system)


YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle