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View Structure Prediction Details

Protein: PSAH2_ARATH
Organism: Arabidopsis thaliana
Length: 145 amino acids
Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16



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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for PSAH2_ARATH.

Description E-value Query
Range
Subject
Range
gi|407353, gi|74... - pir||T15057 photosystem I protein psaH precursor - wood tobacco, gi|407353|dbj|BAA04633.1| PSI-H pre...
249.0 [0..1] [145..1]

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Predicted Domain #1
Region A:
Residues: [1-60]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MASFATIAAV QPSAAVKGLG GSSLAGAKLF IKPSRQSFKT KSTRAGAVVA KYGDKSVYFD  60
   61 

[Run NCBI BLAST on this sequence.]

Detection Method: Pfam
Confidence: 7.102373
Match: PF03244.5
Description: No description for PF03244.5 was found.

Shown below is our most confident prediction for this domain.
Click here to view all matches.

Found no confident structure predictions for this domain.

Predicted Domain #2
Region A:
Residues: [61-145]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 LEDLGNTTGQ WDVYGSDAPS PYNPLQSKFF ETFAAPFTKR GLLLKFLILG GGSLLTYVSA  60
   61 NSTGDVLPIK RGPQEPPKLG PRGKL

[Run NCBI BLAST on this sequence.]

Detection Method: PSI-BLAST
Confidence: 33.0
Match: 2o01H
Description: No description for 2o01H was found.

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle