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View Structure Prediction Details

Protein: PSD7A_ARATH
Organism: Arabidopsis thaliana
Length: 308 amino acids
Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16



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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for PSD7A_ARATH.

Description E-value Query
Range
Subject
Range
gi|17297979 - gi|17297979|dbj|BAB78487.1| 26S proteasome regulatory particle non-ATPase subunit8 [Oryza sativa Jap...
304.0 [0..1] [308..1]

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Predicted Domain #1
Region A:
Residues: [1-226]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MDVIKTQQIS ARTIEKVVVH PLVLLSIVDH YNRVAKDSSK RVVGVLLGSS SRGVVDVTNS  60
   61 YAVPFEEDDK DPSIWFLDHN YHESMFHMFK RINAKEHVVG WYSTGPKLRE NDLDVHALFN 120
  121 GYVPNPVLVI IDVQPKELGI PTKAYYAVEE VKENATQKSQ KVFVHVSTEI AAHEVEEIGV 180
  181 EHLLRDVKDT TISTLATEVT AKLTALKGLD ARLREIRSYL DLVIEG

[Run NCBI BLAST on this sequence.]

Detection Method: PSI-BLAST
Confidence: 44.69897
Match: 2o95A
Description: No description for 2o95A was found.

Predicted Domain #2
Region A:
Residues: [227-308]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 KLPLNHEILY HLQDVFNLLP NLNVNELVKA FSVKTNDMML VIYLSSLIRS VIALHNLINN  60
   61 KLLNKEHEKA EDSKPVAIPA TS

[Run NCBI BLAST on this sequence.]

Detection Method: MSA

Shown below is our most confident prediction for this domain.
Click here to view all matches.

Found no confident structure predictions for this domain.


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