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View Structure Prediction Details

Protein: PORA_ARATH
Organism: Arabidopsis thaliana
Length: 405 amino acids
Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16



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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for PORA_ARATH.

Description E-value Query
Range
Subject
Range
gi|1583455, gi|9... - gi|968975|gb|AAC49043.1| NADPH:protochlorophyllide oxidoreductase A, gi|1583455|prf||2120441A protoc...
284.0 [0..1] [405..1]

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Predicted Domain #1
Region A:
Residues: [1-86]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MALQAASLVS SAFSVRKDGK LNASASSSFK ESSLFGVSLS EQSKADFVSS SLRCKREQSL  60
   61 RNNKAIIRAQ AIATSTPSVT KSSLDR

[Run NCBI BLAST on this sequence.]

Detection Method: PSI-BLAST
Confidence: 15.69897
Match: 2z5lA
Description: No description for 2z5lA was found.

Predicted Domain #2
Region A:
Residues: [87-405]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 KKTLRKGNVV VTGASSGLGL ATAKALAETG KWHVIMACRD FLKAERAAQS AGMPKDSYTV  60
   61 MHLDLASLDS VRQFVDNFRR AEMPLDVLVC NAAVYQPTAN QPTFTAEGFE LSVGINHLGH 120
  121 FLLSRLLIDD LKNSDYPSKR LIIVGSITGN TNTLAGNVPP KANLGDLRGL AGGLNGLNSS 180
  181 AMIDGGDFVG AKAYKDSKVC NMLTMQEFHR RFHEDTGITF ASLYPGCIAT TGLFREHIPL 240
  241 FRTLFPPFQK YITKGYVSES EAGKRLAQVV ADPSLTKSGV YWSWNKTSAS FENQLSQEAS 300
  301 DVEKARRVWE VSEKLVGLA

[Run NCBI BLAST on this sequence.]

Detection Method: PSI-BLAST
Confidence: 60.0
Match: 2p68A
Description: No description for 2p68A was found.

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle