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View Structure Prediction Details

Protein: PKS1_ARATH
Organism: Arabidopsis thaliana
Length: 439 amino acids
Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16



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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for PKS1_ARATH.

Description E-value Query
Range
Subject
Range
gi|25369771, gi|... - gi|5020168|gb|AAD38033.1|AF149053_1 phytochrome kinase substrate 1 [Arabidopsis thaliana], pir||T523...
590.0 [0..1] [439..1]

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Predicted Domain #1
Region A:
Residues: [1-223]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MVTLTPSSAS TPKTSFDFMK NNNSHSSLYV SSSSYLSSKE DALVTTKKLM EPSKTLNMSI  60
   61 NPKQEEFGDE KKMVKKAPED PEIGVFGAEK YFNGDMDSDQ GSSVLSLTNP EVERTVVDSK 120
  121 QSAKKSTGTP SVRSESSWNS QSVLLQNKLV NSCNSSFKEK KNSNGQIQKV TNNKKSFLAN 180
  181 LGCKCACSDG DSVDVEEKTS VKRSADPNIS VITMRSSADM NTE

[Run NCBI BLAST on this sequence.]

Detection Method: deduced

Shown below are all of our de novo (Rosetta) predictions for this domain.
Click here to view only most confident match.

Found no structure predictions for this domain.

Predicted Domain #2
Region A:
Residues: [224-439]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 LIKIQKQEEL SQRKSLEVFG SPVAIEKKSS VVQKKLPLPP WKSRTEEDDT KSEGSDSSSD  60
   61 LFEIEGLTGN PKPFLTRQGS DPASPTCYAP SEVSVEWSIV TASAADFSVM SECATSPVRR 120
  121 NRPTQIPRIP ITAKSAPQRR KSSSSSGGNG FLMSCKSHKS VMVSGDLDRR SSMNKTQPSY 180
  181 VPRFPMETTK PKSFETRRRI SNSSISHTQS SLLYSQ

[Run NCBI BLAST on this sequence.]

Detection Method: MSA

Shown below are all of our structure predictions for this domain.
Click here to view only most confident match.

Found no structure predictions for this domain.


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