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View Structure Prediction Details

Protein: PFD2_ARATH
Organism: Arabidopsis thaliana
Length: 148 amino acids
Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16



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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for PFD2_ARATH.

Description E-value Query
Range
Subject
Range
gi|62901934 - gi|62901934|gb|AAY18918.1| prefoldin subunit 2 [synthetic construct]
112.0 [0..5] [141..36]

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Predicted Domain #1
Region A:
Residues: [1-148]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MASKSGSGGL REPPNEQAVL NMYEGKRSEL SQIYSNITDL EMQVSEHSLV INAIQPLDQS  60
   61 RKCFRMIGGV LVERTIKEVL PAVQRNKDGL EEVVRKLYET LEKKKKDLTE FEAKYKIRIT 120
  121 KQEDNKEGGN KKEGNAQGVL VGAASSSQ

[Run NCBI BLAST on this sequence.]

Detection Method: PSI-BLAST
Confidence: 5.522879
Match: 1fxkB
Description: Prefoldin beta subunit
Matching Structure (courtesy of the PDB):

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle