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View Structure Prediction Details

Protein: PEM2_ARATH, PEAM...
Organism: Arabidopsis thaliana
Length: 475 amino acids
Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16



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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for PEM2_ARATH, PEAM....

Description E-value Query
Range
Subject
Range
gi|28436074 - gi|28436074|dbj|BAC57432.1| phosphoethanolamine N-methyltransferase [Suaeda japonica]
295.0 [0..1] [475..20]

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Predicted Domain #1
Region A:
Residues: [1-123]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MEHSSDLTVE AMMLDSKASD LDKEERPEVL SLIPPYEGKS VLELGAGIGR FTGELAQKAG  60
   61 EVIALDFIES AIQKNESVNG HYKNIKFMCA DVTSPDLKIK DGSIDLIFSN WLLMYLSDKE 120
  121 VEL

[Run NCBI BLAST on this sequence.]

Detection Method: PSI-BLAST
Confidence: 13.09691
Match: 2i6gA
Description: No description for 2i6gA was found.

Predicted Domain #2
Region A:
Residues: [124-390]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MAERMIGWVK PGGYIFFRES CFHQSGDSKR KSNPTHYREP RFYTKVFQEC QTRDASGNSF  60
   61 ELSMVGCKCI GAYVKNKKNQ NQICWIWQKV SVENDKDFQR FLDNVQYKSS GILRYERVFG 120
  121 EGYVSTGGFE TTKEFVAKMD LKPGQKVLDV GCGIGGGDFY MAENFDVHVV GIDLSVNMIS 180
  181 FALERAIGLK CSVEFEVADC TTKTYPDNSF DVIYSRDTIL HIQDKPALFR TFFKWLKPGG 240
  241 KVLITDYCRS AETPSPEFAE YIKQRGY

[Run NCBI BLAST on this sequence.]

Detection Method: PSI-BLAST
Confidence: 8.522879
Match: 1sqfA
Description: The crystal structure of E. coli Fmu binary complex with S-Adenosylmethionine at 2.1 A resolution
Matching Structure (courtesy of the PDB):

Predicted functions:

Term Confidence Notes
transferase activity 0.444447673749491 bayes_pls_golite062009
catalytic activity 0.352837241386487 bayes_pls_golite062009
methyltransferase activity 0.0533354664784367 bayes_pls_golite062009
transferase activity, transferring one-carbon groups 0.0416815045255102 bayes_pls_golite062009

Predicted Domain #3
Region A:
Residues: [391-475]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 DLHDVQAYGQ MLKDAGFDDV IAEDRTDQFV QVLRRELEKV EKEKEEFISD FSEEDYNDIV  60
   61 GGWSAKLERT ASGEQKWGLF IADKK

[Run NCBI BLAST on this sequence.]

Detection Method: PSI-BLAST
Confidence: 41.30103
Match: 1kp9A
Description: CmaA1
Matching Structure (courtesy of the PDB):

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